Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841808.1_cds_XP_016508110.1_21163
CDS Infomation

[gene=LOC107825725] [db_xref=GeneID:107825725] [protein=aspartic proteinase-like protein 2 isoform X2] [protein_id=XP_016508110.1] [location=complement(join(14421..14596,14841..14912,15341..15407,15740..15836,15933..16006,16175..16337,16888..17115,17216..17463,17551..17680,18160..18401))] [gbkey=CDS]
Sequence

ATGATGTCGCCGGTGGTATATTTGGTGTTTGTGTGTGTGTTTTTACCGGCGACGGCGACG
GCGGTGGTGAGTGATGGAATGACGATGACACTGCCGTTAGAAAGAGCTTTTCCGACGAGT
CATGGAGTTGAAGTGAGTCAACTCAAAGCGCGTGACCGAGTTAGACATGGACGAATCTTG
CAATCTTCTTATGGGGTTGTTGATTTCCCTGTTGAAGGCACTTATGATCCATTTCTTGTT
GGGCTTTACTTTACAAGAGTTCAGTTGGGTTCCCCTCCAAAGGAATTCTATGTACAGATA
GATACTGGGAGTGATGTCTTGTGGGTTAGTTGTGCTTCTTGTAATGGTTGCCCGACTTCT
AGTGGACTTCAGATTCAACTAGACTTCTTTGATCCATCAACCTCGTCAACAGCTCGACCG
ATCTCATGTTCGGACCAAAGATGTGCTCTTGGAGAACAATCTTCTGACTCTGGTTGTTCT
ACTCAAAACCAGTGCAGTTACACGTTCCAGTATGGTGATGGCAGTGGGACATCAGGTTAT
TATGTAGCAGATTTTATGCATTTCGATACAATCGTGGGGAATTCTTTGACGTCGAACTCG
TCTGCTCCTGTTGTTTTTGGATGTAGCACTTCACAGACCGGTGACCTAACTAAGCCAGAT
AGAGCAATTGATGGGATCTTTGGATTTGGGCAGCAGGGCTTATCAGTTATCGCACAACTT
TCCTCCCAACGAGTGACGCCAAATGTGTTTTCCCATTGCTTGAAAGGAAGTAACGGCGGA
GGTGGTATCTTGGTGCTAGGTCAGATTGTGGAGCCAAATTTAGTTTACACTCCACTTGTC
CCATCACAGCCACATTACAACTTGAATCTTCAGAGTATTGCTCTCAATGGGCAGACAATG
CCTATTAGTCCAGAAGTATTTGAAACATCAAGCAACAGAGGAACCATAGTTGACTCCGGG
ACGACTCTGGCATATCTTGCTGAAGAAGCTTATGATCCTTTTATTAATGCTATCAATCAA
GCTGTTTCACAGAATGTGCGCCCACTTGTTACCAAGGGAAACCAGTGTTATCTAACCACC
TCCAGCGTCGGTGATATATTTCCAACAGTTAGTTTGACCTTTGCTGGTGGTGCAACAATG
GTATTAAGGGCTGCGGACTACCTTATACAGCAAAACTCCATTGGTGGCGCCGCTGTCTGG
TGCATGGGCTTTCAGAAAATTCCGGGCCAAGGATTGACAATTTTAGGAGACCTTGTTCTA
AAAGACAAGATTATTGTTTACGATTTGGCTGGACAACGGATTGGATGGGCCAATTACGAT
TGTTCGCAGGCTGTTAATGTTTCGTCAACCACAAGCAGAGGGAAAACTGAGTATGTCAAT
GCAGGACAGATCGGTAACAACAGTTCACCGCGTATTGACTCTTACAAGCTGTTATTAAGC
TTCATTCTAACTTCTGTCTTACATGTATTAGTGCGTGGCACTAACTCAGTCTTGTAA

Peptide Sequence

PEP ID

XP_016508110.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Nicotiana tabacum]
Sequence

MMSPVVYLVFVCVFLPATATAVVSDGMTMTLPLERAFPTSHGVEVSQLKARDRVRHGRIL
QSSYGVVDFPVEGTYDPFLVGLYFTRVQLGSPPKEFYVQIDTGSDVLWVSCASCNGCPTS
SGLQIQLDFFDPSTSSTARPISCSDQRCALGEQSSDSGCSTQNQCSYTFQYGDGSGTSGY
YVADFMHFDTIVGNSLTSNSSAPVVFGCSTSQTGDLTKPDRAIDGIFGFGQQGLSVIAQL
SSQRVTPNVFSHCLKGSNGGGGILVLGQIVEPNLVYTPLVPSQPHYNLNLQSIALNGQTM
PISPEVFETSSNRGTIVDSGTTLAYLAEEAYDPFINAINQAVSQNVRPLVTKGNQCYLTT
SSVGDIFPTVSLTFAGGATMVLRAADYLIQQNSIGGAAVWCMGFQKIPGQGLTILGDLVL
KDKIIVYDLAGQRIGWANYDCSQAVNVSSTTSRGKTEYVNAGQIGNNSSPRIDSYKLLLS
FILTSVLHVLVRGTNSVL

Transcript Sequence

Gene sequence data has not been registered.